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wangys_biolab
effector-gan
Commits
b5f7009b
Commit
b5f7009b
authored
Feb 14, 2022
by
wangys_biolab
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negative_train_5966.fasta
1.Training_data/negative_train_5966.fasta
+0
-0
positive_train_93.fasta
1.Training_data/positive_train_93.fasta
+0
-0
negative_validation_test_1492.fasta
2.Validation_set/negative_validation_test_1492.fasta
+0
-0
positive_validation_test_24.fasta
2.Validation_set/positive_validation_test_24.fasta
+48
-0
independent_test_neg.fasta
3.Independent_testset/independent_test_neg.fasta
+0
-0
independent_test_pos.fasta
3.Independent_testset/independent_test_pos.fasta
+35
-0
No files found.
1.Training_data/negative_train_5966.fasta
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1.Training_data/positive_train_93.fasta
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2.Validation_set/negative_validation_test_1492.fasta
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2.Validation_set/positive_validation_test_24.fasta
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>positive1|1
MKSPIVITILATALGALGSYDALPINCRDTTNYCFNGNGRHEVCSYCNQAKEEPLKLGRRGGQRDCGVAGSQCNDVDHQQCDARCCSKIGSPTFYGVRCPYPY
>positive6|1
MMAPKSLQTGLLILLLAKLKLAWGMTLVPRQVTCDYEAAASSGDTCTSFAAEWGLTEETFASLNPSAACPSLVAGQNYCMVGTISAASTTSSSSSTTSSSTTSSSTTSSSTTSSSTTTSSFTTTTASETTSTAANGVTTPMPVQSGMIDSCSKFDLIKSGDTCASIASTYNIDLSSFYSWNPAVGSSCAYLDVGYYVCVDAVPSPVQSGITESCSKFDLVESGDTCASIVSTYNIPLSSFYAWNPAVGSSCAYLDLGYYVCVGTDSSTVATSTTSAGNGITTPTPDEPGMVSDCTKFWLVGSDDTCTSIASSEDITVADIEKWNPKVGSTCTDVWLGDYICVGV
>positive8|1
MQFSTIQLFALMAVGAMANTVAPADVAAVDAPRAPLLVRRNCEGKNTQAECERFKWLTGCTWLRGSKYCSST
>positive16|1
MLFYSLLFFFHTVAISAFTNIGTFSHPVYDYNPIPNHIHGDLKRRAYIERYSQCSDSQASEIRAALKSCAELASWGYHAVKSNNRLFKLIFKTDSTDIQNWVQNNFNEIYKECNRDADEISLTCHDKNVYTCVREEVHNLAYALINEKEIVICPPFFNNPVNSREITAGNQDTIILHEMVHIILKEWKDYGCEWDGIHKLDSTESIRNPDSYAIFAQCARYKYC
>positive20|1
MKLALIASILAAGCVAGPLAQTESESADVAEHTINYIDIAPEEFEPPKANLSSLVSRDTLPVSTCPAGQKYDRSVCYKADKIRSFCVANPRSNREKITDTPCQPREICVQRNLSNGKSFAKCIPIVDLVEWKTSANGNKEGCTTTSVNPAGYHHLGTIVYDINKNPIEVDKISYFGEPGNVNEGIGGSTSYFSSDNFQFSKSRYMKTCIFSGGYGNLNAYTWSWE
>positive22|1
MYGLFHLAVLSATALSASALPQQQEKPGVNKDFICPPEDMKRTHCMGPFDCLYALPGDCLGYIQCQPKDTTYETGIAYERPCRAGQWWNDEKKYCDTVEPPTCKAPVVPASAPAPAPAPAPAPAAPAAPASTSPC
>positive23|1
MRFPVALAYLLFTALPIIQAINLYPEIRHETKVHFWDNGKPFSGYYSQPIRHKVGEKFYDTRCTVYDDGHVYANNPFPVQCYAAVIQYPKKRTAPPMQGNMMPLGNQNMKVAIPLTYLKPEEGSTENQYSIVYYFHPDDYELLKK
>positive39|1
MKLSVISAVFVSLAAAAAAKTTPTREVAAAAAVPDPVQDGIAKNCKTYYQAKPGDSCQKIVNDYGVFTFGDFFKWNPAVGKNCESLLGGWYYCVGVPGTPSKCTEKHPTPTQPGSACKCGQWYKVKKGDNCQALEKKFKISDKDFRKLNGGLNKECSNLQADVNVCVKA
>positive47|1
MKMIFILFSSILALAAANSTPDSDQVPAEFGEYGNYGQYGSYDKYPEVSLPSTATPPTPSAFPNTFVAVTTRSGNTKLHLRPVSASNLNFYIGKETSTYCPLSDCTGFVKFTVFDAQPNNSTSGLSLFTTVPGGQLIYVTKDGQLGYTQAHSAFIPADAKTVPFLYAPNAEPGSVGTLTFNGGGWMACPVEKPDDVFQIYSQNTPGFIRKDCTSVNIVTAVYNGNSAWQYV
>positive56|1
MVQFKTIFLSTALAALFSTGSSSPATKNNVNQPLDNISRRSEWKSVQISPVKEHSAKTADNTENNHNLEKRVFTSPHMKRTFTLALENTFYAMAWLIDFSFSDDGEPHFSYKLQSFNHEDNPPKILADVVVPLITTSYNSANQYRGKANVELLCHLAKEYVHVYFSVEVFASGASFVIGKIIDYPTVYVNNQFRKVVKFDIAGAI
>positive63|1
MLFKIAWVSLFTTWAISVAANPAGDSLPDDAHLPDRRLSPSEVQALKKAQIYPPGYIHKRVTFGEGKDAVEVPIVEADVEMLLNNEKGVKARSLAPRGSCFSFPTPARGSCMIDYCWRDDNGVIYSRGITITGSNGASNPTSMRSNDPANLSLNSVFNDGYNGWFPHGHACSNSDTQIYTNHRLLQGVNGVAYVDHVRCENCNFRNVNCLSDVLKNNLIAYSNGVASQSRCT
>positive64|1
MKLFILTFIWLLTASEVIAAAKKLPGCDKDPCKVKEKSGKYKLKIGAKCSATCDGKLTRGGTCENVQGNHLCCFGLCG
>positive66|1
MQFSQILTVLFLGVSVSALPAGGLPGSPGSAVQRCHCPPRGSHAHGSLAAREEAPEAEGDAKISARYTCPNCHKTGKGCDDGWCQVEKTHW
>positive79|1
MHFVTSLIAGVAMLATASATVQGGAPVDDLKFAKKFNQNCQQISGGPNGAICPDGDLYWCKDGRAIFCQTCQTGCTADENGKVGYCNEGPTNPKCL
>positive81|1
MQIPTSLLALTATLTFAVADPSFRFSEYGNGDTTCSPDNLISPSVSIDDGFGGCKQFPANTNSVQYALLEGSRAGCIVKLFTNNACNESADSEHVPAVGETKCQPPIGGGWQSVQVTCP
>positive92|1
MRSSTTFITIAFIAMQALGIAATQVTILKKGERITWVEVPKGESREFNIRGKYFTVSVSDDGTPSISGSKYTVE
>positive100|1
MRSQALLAVLYASGAIAGGGTYIPKDPALAHRAPEKFPWSGLLNNPFMTKPVIWYQIGQIKIWTDTRDVTYVRDGTKFDTYDQCLSHCLKYSVFNKSKARSSGSQGQTSEYRGRRMHH
>positive103|1
MSSFRSMLGVPPSTASTQDSVLVIIDAQGEYAEGKLKISNIEASRPNISSLLEKYRAANAPIVHVVHETPAGAPLFTQGTKLAEIFDELTPKEGEAVVTKHHPGSFADTNLQEILEKSGKKKIVLVGYMAHVCVSTTARQGAQRGWDVIVAEDAVGDRDIPGVDAAQLVKVALAEIADVFGTLVSSKDIN
>positive104|1
MQFTLAAAAALFGASALAAPASPGSTGAPPDPNMYENIDIADFNVRKGEDGTIKYVNFKLSGDDADGLLCEAQNPGLPSNVITCGESKYRFALSSGKQYEFALSLYHELGLAVGFYGTGEIFTHCRAGGLGDFICQQQNPTTIVIDSLPDAPAEA
>positive107|1
MRSFSLFLVLCIWVIGVIAPGDKASSSAAPAQQHQPSFKLEIAENPNVDPFLEKISKLGNSHDLYPHVALMRTTLYGKDKLTTNLGAYPDFRRFIYLGNSPGVPEMYFAVPLHLNPHGVDRNLAWSLIYAHSDQPKTLVHHGFVSASGGHLVLDKVKKTNYPSSRSFEIGDVLTLREILDIELPALRFAG
>positive111|1
MHFSNAKFLSILAAAAAVKGAPIEESTIQARAVVPHDSINPWGENVPGNALGNTLKRFEPYLHIAHGCQPYSAVDGNGNTSGGLQDTGNVSAGCRDQSKGQTYVRGGWSGGRYGIMYAWYFPKDQPAAGNVVGGHRHDWEYVVAWVNNPEVANPTLIGAGASGHGSIKKTTNPQRQGDRLKVEYYVSFPTNHELQFTNTLGRDLPMMWYDFLPAVSKTALQNTNFGKANCPFNDANFNNNLAKARI
>positive113|1
MRSILQGLLAFALAVGVQARVSCGGIGDLCKAGDSCCNYPGTDCFQDGQYPRCHTACGHFQFGFCHDGKQCNCQVILGCGCV
>positive115|1
MRFTTATLITLSFLAGNVVSAPTAPINDVAAPVEARAADFVDGAHLEARKNKKKKKEGKKDKKAKDNARDLTELEDRDADDVTIVEIRTPEFVADDAHNLEARKNKKKKKKGGKKDKKEKKAKDNARDLTELEARDEEADDAAQLEARKNKKKKKGGKKDKKEKKAKNNARDLTELEARDEEAEDAAQLEARKNKKKKKGGKKDKKEKKAKNNARDLTELEARDEEADDAAQLEARKNKKKKKGGKKDKKEKKAKNNARDLTELEARDEEADDAAQLEARKNKKKKKGGKKDKKEKKAKNNARDLTELEARDEEAEDAAQLEARKNKKKKKGGKKDKKEKKAKDAGAA
>positive116|1
MYRSMKSLALLGLLGPTSQVFAHPATGHAHNIGRRGVDIEAFRLPQVGSYTNATEIETTPPIALLKRESYVETATELVKKLAPNSEFRLVGDHYVGTNGIGHVNFKQTVHGLDIDNGDFNVNIGKDGKVFSYGNNFFKGEAPEASPLKKRDFKDPVSALKGAKDVLQLPVEAASASAEPKEGTEVYSIKGTSGTVSDPEARLVYFVKADGSLALSWRVETDITENWLLTYVDAETGTDVHGVVDYVSDLANYRVYPWGVNDPTEGDRVLVTDPWDISASPLTWQSDGTTNYTTTRGNNGIAQSNPSGGTAYLNNYRPTSAARNFDYQYTTSLTTPSSYIDASIAQLYYTANHYHDLLYTLGFTESAGNFQINNNGKGGVGNDFVVLFAQDGSGTNNANFLTPPDGSNGRMRMYLWTMSTPRRDCSFEAGVVIHEYTHGLSTRLTGGPANSNCLNALESGGMGEGWGDFFATAIRLKPTDTRATDYSMGAWVYNNPAGIRSVLYSTSMTTTPNTYSTINGVSSVHRIGETWATTLYEVLWNLIDKHGKNDGPRPEFDSNGVPTDGKYLTLKLVLDGMALQPCSPNFIQARDAILDADKALTGGDNLCELWTAFAKRGLGSNAVYSSSNRRDGFNVPAGVC
3.Independent_testset/independent_test_neg.fasta
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3.Independent_testset/independent_test_pos.fasta
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>HUM3|1|1
AQFVPVQGTIAALSAVLNEQKAGKRSFSVENTNQVLPIDVIIAGLSQVLTEQKAAKRDNIVKNTNQILPIEATIAALSAIANGQKAATKRSTAVDNSSQFIPIQGTLAAFSNVLNSQKATKRNTGKVVDNTNQVVPIQGTLAALSTVLNEQKASKRGVDVDNSSQTLPIEATIAALSTIANGQQAGKRNAPDFDVVKNSNQVLPIQATAALLSQIANGQSVEKRNAPDFDVVKNSNQVLPIQATAALLSQIANGQSVEKRNAPDFDVVKNSNQVLPIQATAALLSQIANGQSVEKRNAPDFDVVKNSNQVLPIQATAALLSQIANGQSVEKRNAPDFDSVKNSNQVVPIQATAALLSAVKNLQSVERNAPDFDSVKNSNQVVPIQATAALLSQIANGQSVEKRNAPDFDSVKNSNQVVPIQGTAALLSVVGNGQSVSKRHEGENNIVDNTNQVIPIQATIAALSTLLNSQKAERSYSVDNTNQVLPIEATLAAFSSVLNSQKAERSYSVENDNEVVPVDLVAAALSQVANGQKVTRRGETKESIKHNVNQVAPAQASLSALSDIVNSAHSRRAMDVKQYETLQYAINALQQALDKTNTGDKTHHVDAMTGTAEHFDERDAGLDPAAFLGSAASGISVPVGNKDLLKSLVKRYAAEEDEAMAKRTPSLNGRGQRPRPRNSSSSEHNNNGQCSVGEAKCCSQVITDEGKKKTLAGLLGFNNLVGDIGLNCQQIPVLGVSLQSICKATPVCCTNVSQDGLVNVGCTSIPIN
>AvrPm1a|2|1
MRFSKLATIIYAARFLSAAFSYKTAHIEEGSKGFICHGDFFSEANYRDDKIRALKVLKHSHNTPFDVEMLQDIFVSEKPENFMMYDNSDAKGHYLFLLPSLTKVYPKNSYDLRHEYHLLLDDSGRTCALMLWKIKITPKGKSSEEPTYEICSVHS
>AVRa10|3|1
MKTFIPKLAIVLFSLVVPALADGWTCAGSDFDGDQVRGQARHWVDQQKTKFSDFQTHDGVQLCHFELGEGNQLTQSITGFRAYCDEPGDVYNVRYWDVSSRTWVLCTHYDIDFESDYR
>SIX10|4|1
MKLLWLIPVVASTAIPDSGVSTGTKDLSKRDDAYIFDVTFRVGPAGANVAPFSGSVYVQDGLTPLVRSGSGSSISDRGYNAFRGIVYFTFTHGYNQYSASTRFGVYVDTGLIVDSNGRPIYGTAPRKACIDYSPHGPTDVCSVTITRSK
>HvEC016|5|1
MLASTFFFIFFALCSWNSINFVAAQDATVIAQEYIQVTNSIQTQISTCKQLVASSSGRPQVITQFYQVIQSFQIKIRSKCKGCGSGITAACHQNRVDVRIKEVIDTFQSLVITMYDTPGLLQACISYVTVEKITASYTLLMKNCRIITGYQVTQYVTQLFITTMQNCGVSISAVISGVDSISINTIIGGLGIDLNIGFGINIGGSGGGGGGGISVGGNIGIGINI
>Six13|6|1
MTRFHLILLPLLFSWFSYCLGELEVSDLSDQPPSVENTYRDQAFNEEELLKVVDELSVERTEHTERALVSEAAVQKRQDDEHPNGPCPRGGRLYVDSDEDSSCNAKWGTQTHNDVKTFGSTGSVCAGTFRRITCACCYTMHPITDNNVPRMDGIYCPKWEVCKQEPERWSKWGNRVSHTSCVQAKKLTEILIATKKVVKEYCTPKRWLPSAGKGKNAKFHTWAYNYSTGQLTTLKWMYLKLDGQYVKSAPGISEWGLTYSVNEHNAIELCGYPSDDMQRNSIDAELQWEATVQ
>Cce1|7|1
MHRPTSLYVTLICLLGTVMSVRAATQRVGDSCSYKQNCQDWAEGVGPDWAKGAITCAVPQDGKPEKCGSGDKKGRDEFSGVCKAVGTLSATEYGCACGVHKADCPETSPFSRIFWPQDWLETAWSQVHH
>SIX9|8|1
MKLLAVVATALAVFSTAEAQTTQVGCRALDTKNDGLLTELLLNPSARGAADPDLRYGFWDAKWRKCCNKYKECDKYYTFSYNHPYPWAYRQRRGTIRGQQFDFACVNWRTGACK
>SIX12|9|1
TTLAQASSCLSVGPKGINNQNACVCGGQCVMADLVVAGRKICCEYTVQIQGGWPVLANSHCVYGSTGANGGSCSGNQVSLAWWHNYEPEVKSTDSKCIFAKPKLCHS
>Six14|10|1
MHTEYLFLLLIPMGAVSQRILGCRMPNGSLNPSPNICNQAGGSFRSGSRGCCTRNTRDGPVVTESRFISGCNKNGGFVSSKEILATSC
>AvrSr27|11|1
MHYITPIILMSIGKFLGMILGAGSLVGAMTPHHQSNCNSPCLVFVTFTKKCDSCQFNTKFTNLMSCTSCRKSSVVYEECSTKGCPANWHKSTCQEPKFERGVLHSLCANCQKHTKATPTISCKNCKNSASTYPYCSSPECHRRW
>SIX11|12|1
MMFSKAIPISLLISTSHAINICCSSFAGHTCTKDQYNNHRQNVILNQIIDKDGVNCVRKGAGPGRWTRKGDWSEWYDCQQWNGPEQHQIEVGECTLFCVTPSGILNRPCI
>OSP24|13|1
MRYLQNIVLLIGFLGAAPAVLAVAPSTESSGVEIAQPNAADAQPPQAIQPQDVEDENDEEEDDLTGNDGAAVLAQLESRARVKCLTRGRPGKNCYHSQCPGNKQCKVNTRGNCVFELSQKKRPFGCSQCLCYRSSL
>AVRa9|14|1
MKITPASITLLSFLVPALGLTGYDCQGHFISVNVINHAINSDISSKSGRHSYQENAGLHPENRSARISYNVDGDPYWGAWVEYGQNKEILEVYSSSGKCGPC
>SCR108|15|1
MNLSLFVAAVLCVAFQAAEATTHLRVHILTELASAGQQCEWVNKAVKCDAATFCQKSDKHTGFCMKKKPGLNDQCGGKGVNGPWSVTCNATNLKCVQQSSTVKANMKKLFAIKSGNFGVKRRCATLTTLLLSILLVAVTSTSNAAAKEAAFNASDYWAKDQPYKFQPQWTRLPDGKVVANNGSNFSNFTEYRGAVEAKTPRF
>PITG22926|16|1
MLRSFLLIVATVSLFGQCKPLPLATSPVSDAVRAPHRSTHETRFLRTNDEERGATMTLAGVLRDKAQTKQLLTSWLNSGKSVPSVSNKLGLKRMSLEQAIHHENWKALTTFQRMKSKKAKAYAKYGTGYQTEAKTKENLLQWVMRGDSPKEVSSTLGLLGLSRRKIIDHQNYEAFRTFLKYRKQWAEMQGNGFTKLTT
>AVRa7|17|1
MKFLSAASMATLSGLLLSATAHAADPYFECSMNTAVSFSGIIFYEQSHEYLDAEPGDPEGPNGEIYPARRFTRVRRDGSDVLILIQSLDEYPLRRAYEKTEQGWRLCPFHKP
\ No newline at end of file
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